Other Products

Resource Tutorials

Writing and building tools for the community isn't helpful if no one knows how to install or use them. Extensive documentation of case studies and tutorials is included with most of my projects.

Tool Tutorials

Community Tools

Genomes aren't inherently useful on their own. Providing context through interlinked web-based tools helps research communities use and build on prior results.

Example Site

Educational Games

Learning is more fun when you had fun writing the material. My team built a Linux command line tutorial based on My Little Pony Dungeon Crawling, which was quite popular.

PonyLinux

Research Support Code

Eukaryotic Metatranscriptomics Workflow: kallistaconsulting. (2023). Euk_MT [Computer software]. GitHub. https://github.com/kallistaconsulting/Euk_MT

Visualization of Microbial Data Workflow: kallistaconsulting. (2020). Microbial‑visualization [Computer software]. GitHub. https://github.com/kallistaconsulting/Microbial-visualization

Shiny App for RNAseq Analysis: Brooks, E. M., Sanders, S. A., & Pfrender, M. E. (2024). freeCount: A coding-free framework for guided count data visualization and analysis (Version from kallistaconsulting/freeCount) [Computer software]. GitHub. https://github.com/kallistaconsulting/freeCount

Transcriptomics Workflow (outdated): kallistaconsulting. (2019). de novo Transcriptome Assembly Pipeline [Computer software]. GitHub. https://github.com/kallistaconsulting/de-novo-transcriptome-assembly-pipeline

Linux Tutorial Game: kallistaconsulting. (2020). Pony Linux Tutorial [Computer software]. GitHub. https://github.com/kallistaconsulting/PonyLinux

Job Scheduler Game: kallistaconsulting. (2020). Scheduler Tetris [Computer software]. GitHub. https://github.com/kallistaconsulting/sched_tetris

Genome Browser Demo Site

Clogmia Genome: not up on NCBI yet

GitHub: https://github.com/kallistaconsulting/genomic_resources_clogmia

Tutorial: https://github.com/kallistaconsulting/genomic_resources_clogmia/blob/main/tutorials/
Demo Site: http://149.165.151.125/home

Megaselia Genome: https://www.ncbi.nlm.nih.gov/datasets/genome/GCA_048544405.1/
Project GitHub: https://github.com/kallistaconsulting/genomic_resources_megaselia
Tutorial: https://github.com/kallistaconsulting/genomic_resources_megaselia/blob/main/tutorials/
Demo Site: http://149.165.173.182/home